Moose input file. This page is user-facing, i.


  1. Moose input file. The instructions for how to do that are right on the getting started page. This tutorial teaches you how to create custom MOOSE objects, setup input files to invoke these objects, and how to process and visualize the results of your simulations. Syntax highlighting for: Valid top level blocks Valid sublevel blocks Special highlight for the type = TypeName lines Highlight valid Function Parser functions in parameter strings Highlight valid parameters for shape function family/order file_baseThe desired solution output name without an extension. lexical order) from top to bottom of the input file. SolidMechanics QuasiStatic Physics The third top level block has a path with three components in the title. which will create a mesh named solid_mesh_in. g [block_name] type = custom HeatSource Description The HeatSource kernel implements a volumetric heat source/sink forcing term. Nov 11, 2024 · MOOSE Language Support: Syntax highlighting, automatic indentation, document outlines, mouse hover info, formatting, and auto-completion for MOOSE input files, C++ code snippets for all MOOSE systems, and highlighting of select MOOSE C++ types. A complete list of the available options is provided in the parameter list at the May 18, 2021 · Example Syntax and Mesh Objects Mesh settings are applied with the [Mesh] of the input files, for example the basic input file syntax for reading a file from a mesh is shown below. Input File Syntax A basic moose input file requires six parts: Mesh Variables Kernels BCs Executioner Outputs Mesh The domain for the problem is created with the Mesh block in the input file. To deal with HIT files we provide the hit executable, which is automatically built under framework/contrib/hit. Question Does MOOSE have any built-in functionality for doing variable substitution in the code? I have an App that reads in information directly from JSON files, so I can't use input file ${env foo} type substitutions. To do that, use the following syntax: File Format Moltres is built on top of the MOOSE framework, and the input file uses the "hierarchical input text format" (hit) input format adopted by MOOSE. , input. All initial conditions default to zero and we only have displacement variables in the system. FileMesh Read a mesh from a file. Example The example in Peacock is a graphical front end for the MOOSE input file syntax. Since MOOSE contains a lot of ability to read/generate/modify meshes - it's often useful to be able to run all of the Mesh related portions of the input file and then output the mesh. Table 1 is a list of the tools/scripts developed in Python that are distributed with MOOSE and Python Source links to the source code documentation. These files are required to perform restart or recovery operations with a MOOSE-base application. Here the mesh is read from the file mug. This command line tool offers multiple functions for Finding parameters across many input files File Format Moltres is built on top of the MOOSE framework, and the input file uses the “hierarchal input text format” (hit) input format adopted by MOOSE. MOOSE supports reading and writing a large number of formats and could be extended to read more. , base. The Input/Output System consists of two main subsystems: Instead of a static JSON dump the plugin now launches a MOOSE executable with the --language-server option and communicates with it through LSP. You can also compile and run the examples in a similar manner and learn quite a bit before you start building in your own application. Sep 15, 2021 · Simply set the proper typein your input file (e. Reading with the FileMeshGenerator. . i. This command line tool offers multiple functions for Finding parameters across many input files The hit command Hierarchical Input Text (HIT) is the file format that MOOSE input files (and tests specs) are built upon. To avoid having to do this individually for each block, I use variables that contain lists of block names. Blocks Nov 11, 2020 · Dear all, I just begin to learn how to use MOOSE. The complete source documentation for the package is provided in pyhit source documentation page. Example The example in The input files are processed from left to right, so in this example, base. The strong form is q undefined H e a t S o u r c e + o t h e r k e r n e l s = 0 ∈ Ω HeatSource−q˙ +other kernels=0∈Ω where q q˙ is the volumetric heat source. g used in parsed functions, is it possible to define it in one loc The default naming scheme for output files utilizes the input file name (e. Environment Adding Peacock to yout PATH will allow you to launch it from your application or "tests" directory. Mar 8, 2024 · Hierarchical Input Text (HIT) is the file format that MOOSE input files (and tests specs) are built upon. This command line tool offers multiple functions for Finding parameters across many input files Jun 22, 2023 · MOOSE MOOSE is a powerful software framework that nuclear energy scientists and engineers use to perform physics simulations using finite element analysis. A MOOSE Action is a convenience object that can setup We use the input file for a simple thermo-mechanical cube with higher order quads. AnimalApp) and MOOSE will attempt to find the other library dynamically. This page is user-facing, i. This is accomplished by providing a fully-qualified name/value pair on the command line corresponding to the parameter you wish to override or add. To help make writing MOOSE input files easier on a common editor found on almost all remote computation resources, I want to make a Vim plugin that does the style right, highlights keywords, does folding, and does section movement correctly. i) so that you do not duplicate it (and thus risk changing it in one input file but not another). Supported File Formats The FileMesh is the default type for MOOSE and as the name suggests it reads the mesh from an external file. /moose_test-opt [<options>] Options: --check-input Check the input file (i. Each example can be used by running a binary that is first compiled by running make in the applicable subdirectory. Paraview Workspace The Paraview workspace consists of the following basic areas: Header rows: These contain a number of different buttons and dropdowns for various operations such as opening files, playing transients, controlling views, and creating pyhit package The input file syntax MOOSE uses the HIT format. These capabilities are inherited from the libMesh file IO readers. Passing Input File Parameters from Command-Line It is possible to pass input file parameters via a command-line interface. It allows for analyzing and optimizing nuclear reactors and fuels, helping to improve efficiency and safety. The sub-block syntax uses the actual sub-block name as the suffix. i extension and are formatted using the HIT format, which is a nested block structure. The "app_type" is the name of the MooseApp derived app that is going to be executed. Although configuring and Variables System Description The Variables block within an input file is utilized to define the unknowns within a system of partial differential equations. requires -i <filename>) and quit. This is a relatively simple file format that uses [names in brackets] to mark the start of input blocks. This tool automatically outputs material properties as fields in the Exodus file. MOOSE actually sets up the appropriate preconditioning block for us automatically in this case, which is why we removed it from the input file here. A brief description of the input syntax is presented here. For additional information on the other types of Mesh objects refer to the individual object pages listed below. Every parameter in the GlobalParams block will be inserted into every block/sub-block where that parameter name is defined. Checkpoint Output for MOOSE recovery checkpoint files. This command line tool offers multiple functions for Finding parameters across many input files The input file syntax MOOSE uses the HIT format. If not provided, MOOSE sets it with Outputs/file_base when available. Controls System The Controls system in MOOSE has one primary purpose: to modify input parameters during runtime of a MOOSE-based simulation. These parameters are defined in the validParams() method. Generally, this is the name of the application being executed, therefore if this parameter is omitted it will default as such. The nonlinear variables defined within this block are used by Kernel objects to define the equations for a simulation. /input path with space/ex01. Apr 4, 2024 · We recommend it because of support for MOOSE input files; the extension "MOOSE Language Support" provides: − Syntax highlighting for MOOSE input files − Autocompletion − Class and parameter descriptions An illustration for mesh in UNV file format and requirement of on-the-fly names of block and boundaries in moose input file. Together, these components form the entry point for all MOOSE-based applications and control the workflow from input file parsing to simulation execution. Usually the previous and new simulations use different input files. For developers, please refer to the NEML2Action and NEML2ActionCommon pages regarding what objects are constructed by the underlying Action. May 18, 2021 · Input File Format MOOSE input files use a . --color [auto,on,off] Whether to use color in console output (default 'on'). For example, the input file snippet below demonstrates how to enable the material property debugging tool. What did you observe when you ran the converted example? Nov 11, 2024 · Input File An input file used by MOOSE-based applications is a human-readable text file that can be prepared in an ordinary text editor. You can think of the MOOSE input file block structure like a directory. Otherwise, MOOSE uses input file name and this object name for a master input or uses master file_base, the subapp name and this object name for a subapp input to set it. e. On the command line, I frequently use syntax like . Setting up a coupled conjugate heat transfer problem can broadly be boiled down to the following steps: Create an OpenFOAM case. When I try to run an input file in tutorials, how could I give a command in the terminal? I mean not use . This command line tool offers multiple functions for Finding parameters across many input files . Multiapp Output When Before you run this first input file take a moment to think about what you expect to happen. Peacock allows the user to build or modify an input file, execute an application, and view the results, all within one package. We have specified no boundary conditions and no loading. MOOSE input files use a . May 18, 2021 · > . Aug 21, 2023 · Is there a way to define truly global parameters in the input file? Say I have a parameter that is included in several locations e. Actions can also enforce consistency in the simulation definition. Example Input Syntax The simplest method for enabling checkpoint files is FileMeshGenerator Read a mesh from a file. i MOOSE seems to interpret space in the input argument as having multiple input files: *** Info *** Merging inputs . Note that if the same input parameter appears in Input File Syntax MultiApp objects are declared in the [MultiApps] block and require a "type" just like any other block. Note that if the same input parameter appears in multiple input files, the value in the rightmost input file on the command line takes precedence, i. This example is mainly taken from the tutorial gempy export MOOSE from the official GemPy repository. /run_tests for all, but just run one at a You can think of the MOOSE input file block structure like a directory. Each subdirectory has code for a MOOSE-based application and input file (s) for running simulations. e which is a relative path starting in the same directory as the input file itself: [Mesh] file = 'mug. GlobalParams System Overview The global parameters system is used to define global parameter values in an input file. HIT is a key-value pair syntax with multilevel block hierarchies. Vim style documentation also included and accessed by :help moose_fw. Including an OpenFOAM mesh. i extension and are formatted using the Hierarchical Input Text (HIT) format, which is a nested block structure. Recover: Resuming an existing simulation either due to a fault or other premature MOOSE Framework input file support in AtomMOOSE input file support in Atom Add syntax highlighting and snippets to MOOSE input and test spec files in Atom. By convention, blocks beginning with capital letters are syntax that is dictated by the application. i is processed before input. This method is static to allow for it to be called independently and prior to object construction. The output files created contain a complete snapshot of the simulation. MOOSE MOOSE (Multiphysics Object-Oriented Simulation Environment) is an open-source, parallel finite element, multiphysics framework developed by Idaho National Laboratory. The available settings for this command are included in Table 6. This feature is useful when you have multiple input files that share input: you can factor out the common input into another file (e. Environment Set-Up Load the MOOSE module. Blocks Every input file will contain blocks with the following format: [BlockName] parameters [] Brace expressions are evaluated in input-file order (i. We pass this to our input modifier specifying the moose comment character (s) as ‘#’ and moose input files do not have a line end character so we pass an empty string. For each input file block, the user can browse the syntax page for classes prefixed with MFEM or, alternatively, browse the MFEM section of the source page. The hit command Hierarchical Input Text (HIT) is the file format that MOOSE input files (and tests specs) are built upon. The path (relative preferred) can be set in your input file using the parameter library_path; this path needs to point to the libfolder within an application directory. Are there any MOOSE utilities that can do this already? If not I can probably figure this out in my App. Example The example in moose-input README This is the README for your extension "moose-input". It provides a high-level interface for nonlinear solver technology 1. No forces act on any of the elements. A valid UMAT subroutine has the following call signature Debug System Overview The [Debug] input file block is designed to contain options to enable debugging tools for a simulation. Input Parameters Every MooseObject includes a set of custom parameters within a single InputParameters object whose values may be controlled by its user via an input file. /moose-opt -i common_input. For this case, you may employ the SolutionUserObject class. Common uses for actions are to perform setup and create MOOSE objects. Brace expressions must not depend on field values using brace expressions that occur later in the input file - although they can depend on field values without brace expressions that occur later in the input file. If a developer has marked a MOOSE object input parameter as controllable, that parameter may be controlled during a simulation using Control objects. Control objects are defined in the input file in the Controls block, similar to other systems in MOOSE MOOSE is based on systems (e. Note that the above command takes advantage of a MOOSE feature for combining input files together by placing some common parameters used by the other applications into a file named common_input. See full list on github. MOOSE Tools The MOOSE code itself is written in C++, but everything around it that supports it is written in Python. /input, path, with, space/ex01. Example The example in Restart and Recover Definitions Restart: Running a simulation that uses data from a previous simulation. i MOOSE Action System MOOSE Actions are used to execute tasks. Write a MOOSE input file to run that case. The parser abstraction expects information to be organized into a hierarchy of blocks with zero or Parser The MOOSE Parser object is responsible for interacting with the HIT input file parser. com Apr 26, 2025 · The MOOSE Input/Output System handles how simulations are configured through input files and how they produce results through various output formats. g. pyhit package The input file syntax MOOSE uses the HIT format. Is there a way to support / hack such input format? Peacock Peacock is a graphical front end for the MOOSE input file syntax. Export a GemPy Model to MOOSE ¶ This section briefly describes how to export a GemPy model to get a working input file for MOOSE. MOOSE applications traditionally consist of an executable and an input file configuring the simulation. The "pyhit" package provides tools for reading, writing, and manipulating these files from within python. Also, scalar variables that are A UMAT file my_umat. This is a relatively simple file format that uses [names in brackets] to mark the start and end of input blocks. Output to this object can be controlled in various ways from the [Outputs] block. are assigned to the blocks in various commands in the Moose input file. f can be loaded by the AbaqusUMATStress by providing the the full path and filename without an extension via the "plugin" parameter in the MOOSE input file. file_baseThe desired solution output name without an extension. Because MOOSE pyhit package The input file syntax MOOSE uses the HIT format. Nov 30, 2023 · Properties etc. This Many test input files also create an output file with the name format example_input_out. Control objects are defined in the input file in the Controls block, similar to other systems in MOOSE Paraview Basics Paraview can read a number of different file formats, including the Exodus format, which is the primary output format for MOOSE. Overview The Checkpoint output object is designed to perform restart and recovery of simulations. Peacock allows the user to build or modify an input file, execute the application and view the results all within one package. Peacock is a graphical front end for the MOOSE input file syntax. i) with a suffix that differs depending on how the output is defined: An "_out" suffix is used for Outputs created using the short-cut syntax. C++ Type: std::string Controllable: No Description: The desired solution output name without an extension. The package uses the same underlying C library used by MOOSE. e' [] Peacock is a graphical front end for the MOOSE input file syntax. Within an input file, you can declare a block with your material values, e. Creating Actions To create a new action This page is user-facing, i. Sep 15, 2021 · Tutorial 1: Application Development Learn how to develop a MOOSE-based application to solve coupled systems of differential equations in a multiphysics setting. Syntax is used by the input file parser to generate actions. You'll need to specify the coupled boundaries and the time step. Aug 9, 2022 · Hi everyone,I am very new to the MOOSE software and I want to extract the mesh obtained in ABAQUS to input it as a MOOSE generated file input to create the mesh and elements? or can you tell me how Mar 8, 2024 · Brace expressions are evaluated in input-file order (i. /snail -i . However this system is designed for running another Input File An input file used by MOOSE-based applications is a human-readable text file that can be prepared in an ordinary text editor. , Kernels), where each system contains a set of objects, actions, and subsystems that can be used within an input file block. It also relies on the "moosetree" package. This will configure your shell environment to support building an application via the MOOSE framework to run Apr 26, 2025 · MooseApp and Action System Relevant source files This page explains the core architecture of the MOOSE framework, focusing on the MooseApp class and the Action system. After writing up a brief description, we recommend including the following sections. e that contains all the simulation results that have been selected for output. The zero displacement initial condition should already be a solution to the given problem. Supported File Formats The FileMeshGenerator is the default type for MOOSE and as the name suggests it reads the mesh from an external file. e which is a relative path starting in the same directory as the input file itself: MOOSE Verification Workshop Framework Examples The MOOSE repository has a directory named examples with several subdirectories. This command line tool offers multiple functions for May 13, 2023 · I read through the documentation and believe I understand how the material file system works. --definition Shows a SON style input definition dump for input validation --disallow-test-objects Don't register test objects and syntax -v --version Print application Mar 16, 2023 · Sometimes it is handy to collect common inputs in one input file, then add on some other stuff in another input file. The corresponding weak form, in inner-product notation, is R i (u h) = (ψ i, q) ∀ ψ i, Ri(uh)=(ψi,−q˙) ∀ψi, where u Nov 11, 2024 · Input File Syntax A basic moose input file requires six parts: Mesh Variables Kernels BCs Executioner Outputs Mesh The domain for the problem is created with the Mesh block in the input file. Parser The MOOSE Parser object is responsible for interacting with the HIT input file parser. Each task is associated with one or more actions, and each action may perform one or more tasks. We expect the residual MOOSE supports a variety of mesh file formats; most commonly used is the Exodus format. The type refers to a C++ class which defines its input file parameters. Console The Console object in MOOSE is a buffered ostringstream object that should be used to for all screen based output. MOOSE Language Support: Syntax highlighting, automatic indentation, document outlines, mouse hover info, formatting, and auto-completion for MOOSE input files, C++ code snippets for all MOOSE systems, and highlighting of select MOOSE C++ types. , the Input file syntax section explains how to write the MOOSE input file in order to connect MOOSE to NEML2 for material modeling. This new approach will allow us to vastly expand autocompletion in the future. Sep 15, 2021 · Input File Syntax A basic moose input file requires six parts: Mesh Variables Kernels BCs Executioner Outputs Mesh The domain for the problem is created with the Mesh block in the input file. As will be evident from examining this file, coupled physics models are defined by combining the components from all of the physics in a single input file, and defining interactions between the physics. The QuasiStatic Physics is nested under Modules and SolidMechanics. Sep 15, 2021 · Peacock Peacock is a graphical front end for the MOOSE input file syntax. The only requirement is that the included files must contain a set of syntactically complete blocks or parameters. Overriding Input File Syntax When running multiple cases with similar input parameters, it can be convenient to supply some arguments right on the command line. e' [] The hit command Hierarchical Input Text (HIT) is the file format that MOOSE input files (and tests specs) are built upon. It is important to note that this object is not responsible for the raw file-base I/O. It will guide you through the process of exporting a geological model generated in GemPy (Tutorial Chapter 1-1 therein) so it is usable as a Mesh # in the MOOSE Dec 5, 2016 · The "test" application is a full MOOSE-based application and there are several working input files ready to go in that area. The parser abstraction expects information to be organized into a hierarchy of blocks with zero or Much of the syntax of the usual MOOSE input file is preserved when creating input files for MFEM-MOOSE. May 19, 2020 · The second case is similar to the first, but it is simply an exodus file that has a mesh, perhaps a deformed one, and the mapping of nodal and field values over that domain, with no particular origin - perhaps it is an exo file output from some other MOOSE input file execution. A MOOSE Action is a convenience object that can setup multiple aspects of a simulation for the user, resulting in a more compact syntax. Information can be disabled, output at a lower frequency, colored, or color removed. /moose_test-opt --help Usage: . It is desirable to list the available object for a given system, which is the reason behind the !syntax list command. The underlying structure of the MOOSE input file is dictated by HIT and information on the format can be found here. Each application registers numerous actions, tasks, and syntax. This can be a useful mechanism of reducing duplication in input files. This page explains the architecture of both input parsing and output generation components, their interactions, and configuration options. Each MooseObject derived class has access to the _console member for screen writing. The model shown here builds on these thermal and mechanical models by simultaneously solving for the thermal and mechanical response. Data in this context is very broad, it can mean spatial field data, non-spatial variables or postprocessors, or stateful object data. The type of each parameter is specified in the C++ class and is documented in the user manual. The temperature on the fluid-solid interface is provided by Thermal Hydraulics Module (THM), while the heat source is provided by OpenMC. i I ran the above command in WSL and I also tried to put quotes around the file path but it did not help. Compute Variable Eigenstrain Computes an Eigenstrain and its derivatives that is a function of multiple variables, where the prefactor is defined in a derivative material Description ComputeVariableEigenstrain calculates the eigenstrain as a function of a specified variable as well as the contributions of the eigenstrain to the first and second order derivatives of the elastic strain. , files to the right override the files to the left. This can be used in any arbitrary nested context in an input file, and included files can include other files. These unknowns are often referred to as nonlinear variables within documentation. xn zoq7v hw6mcm 5xu wrws0p ngs 41rk qmc8oco2 wdk7y bat